pegasus.pseudo.write_results_to_excel¶
- pegasus.pseudo.write_results_to_excel(results, output_file, ndigits=3)[source]¶
Write pseudo-bulk DE analysis results into a Excel workbook.
- Parameters
results (
Dict[str, pd.DataFrame]
) – DE marker dictionary generated bypg.pseudo.markers
.output_file (
str
) – File name to which the marker dictionary is written.ndigits (
int
, optional, default:3
) – Round non p-values and q-values tondigits
after decimal point in the excel.
- Return type
None
- Returns
None
Marker information is written to file with name
output_file
. In the generated Excel workbook, each tab stores DE result of up (up) / down (down)-regulated genes.
Examples
>>> pg.pseudo.write_results_to_excel(marker_dict, "result.de.xlsx")