Pegasus for Single Cell Analysis

Pegasus is a tool for analyzing transcriptomes of millions of single cells. It is a command line tool, a python package and a base for Cloud-based analysis workflows.

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Release Highlights in Current Stable

1.6.0 April 16, 2022

New Features

• Add support for scVI-tools:

  • Function pegasus.run_scvi, which is a wrapper of scVI for data integration.

  • Add a dedicated section for scVI method in Pegasus batch correction tutorial.

  • Function pegasus.train_scarches_scanvi and pegasus.predict_scarches_scanvi to wrap scArches for transfer learning on single-cell data labels.